Project information
- Category: Single-Cell analysis
- Project date: July, 2020
- Project URL: https://github.com/reactome/descartes_rpa
descartes_rpa
Python pipeline to extract pathway activity from single-cell clusters in a systematic manner, annotating each cluster with which pathway(s) it represents. Pathways are annotated by extracting the differentialy expressed genes found in each clusters. Then, the pathways represented by these genes are retrieved using the Reactome analysis tools.